C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 6 open reading frame 52
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036015 TRNAU1AP 7955 - 19:30374779-30384383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052292 TRNAU1AP-001 30374779-30384383 protein_coding
  ENSDART00000133920 TRNAU1AP-002 30379430-30384365 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052292ENSDART00000133920
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052292 0.701±0.16 1.705±0.88 4.811±1.72 1.360±0.00 0.404±0.00
ENSDART00000133920 0.525±0.14 N/A 3.910±0.00 N/A 0.323±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137434 C6orf52 chromosome 6 open reading frame 52 protein_coding Homo_sapiens
ENSG00000180098 TRNAU1AP tRNA selenocysteine 1 associated protein 1 protein_coding Homo_sapiens
ENSMUSG00000028898 Trnau1ap tRNA selenocysteine 1 associated protein 1 protein_coding Mus_musculus

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