Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	homeo box A3a
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSDARG00000036231	hoxa3a	7955	+	19:19220695-19245990	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSDART00000052633		hoxa3a-002	19227928-19245990	protein_coding
	ENSDART00000080466		hoxa3a-009	19233312-19235118	protein_coding
	ENSDART00000129600		hoxa3a-008	19221922-19226649	processed_transcript
	ENSDART00000135423		hoxa3a-007	19220695-19234418	processed_transcript
	ENSDART00000137735		hoxa3a-004	19238609-19243530	protein_coding
	ENSDART00000138905		hoxa3a-006	19222170-19243455	protein_coding
	ENSDART00000144019		hoxa3a-005	19241502-19243760	protein_coding
	ENSDART00000146993		hoxa3a-001	19243182-19245990	protein_coding
	ENSDART00000147360		hoxa3a-003	19227711-19243464	protein_coding

Expression Patterns

Transcript ID	Brain	Heart	Kidney	Liver	Muscle
ENSDART00000052633	N/A	0.134±0.08	2.386±0.88	N/A	N/A
ENSDART00000080466	1.068±0.44	0.529±0.00	0.966±0.00	0.036±0.00	1.499±0.00
ENSDART00000129600	N/A	0.136±0.00	N/A	N/A	N/A
ENSDART00000137735	N/A	0.277±0.03	N/A	0.117±0.00	N/A
ENSDART00000144019	0.372±0.00	N/A	N/A	N/A	N/A
ENSDART00000146993	0.267±0.03	0.112±0.07	0.364±0.00	0.046±0.00	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007OD	CIL_0007OD_0006	UCNEbase	19:19094506-19320701
CIL_0006I0	CIL_0006I0_0001	CGP	19:19213175-19227976

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003677	IEA	DNA binding
GO:0003700	IEA	sequence-specific DNA binding transcription factor activity
GO:0005634	IEA	nucleus
GO:0006351	IEA	transcription, DNA-templated
GO:0006355	IEA	regulation of transcription, DNA-dependent
GO:0007275	IEA	multicellular organismal development
GO:0043565	IEA	sequence-specific DNA binding

No Homologs available.
Homologs

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