C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006I0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009461-ENSDARG00000096510 CGP 7955 19:19213175-19227976
GeneTranscriptPositionBiotype
ENSDARG00000001784 (hoxa5a)
homeo box A5a 		ENSDART00000003506 (hoxa5a-001) 19225322-19226716 protein_coding
ENSDARG00000036231 (hoxa3a)
homeo box A3a 		ENSDART00000052633 (hoxa3a-002) 19227928-19245990 protein_coding
ENSDART00000080466 (hoxa3a-009) 19233312-19235118 protein_coding
ENSDART00000129600 (hoxa3a-008) 19221922-19226649 processed_transcript
ENSDART00000135423 (hoxa3a-007) 19220695-19234418 processed_transcript
ENSDART00000137735 (hoxa3a-004) 19238609-19243530 protein_coding
ENSDART00000138905 (hoxa3a-006) 19222170-19243455 protein_coding
ENSDART00000144019 (hoxa3a-005) 19241502-19243760 protein_coding
ENSDART00000146993 (hoxa3a-001) 19243182-19245990 protein_coding
ENSDART00000147360 (hoxa3a-003) 19227711-19243464 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006I0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000078399-ENSG00000257184 CGP 9606 7:27162435-27180013
GeneTranscriptPositionBiotype
ENSG00000078399 (HOXA9)
homeobox A9 		ENST00000343483 (HOXA9-001) 27162435-27165530 protein_coding
ENST00000396345 (HOXA9-003) 27163521-27165526 protein_coding
ENST00000465941 (HOXA9-006) 27163664-27175180 processed_transcript
ENST00000487384 (HOXA9-004) 27163307-27170498 processed_transcript
ENST00000489695 (HOXA9-005) 27163682-27169737 processed_transcript
ENST00000497089 (HOXA9-002) 27162600-27169444 processed_transcript
ENSG00000253293 (HOXA10)
homeobox A10 		ENST00000283921 (HOXA10-001) 27170591-27174306 protein_coding
ENST00000396344 (HOXA10-003) 27171220-27180261 protein_coding
ENST00000519593 (HOXA10-006) 27171777-27172889 processed_transcript
ENST00000521421 (HOXA10-005) 27171463-27172889 processed_transcript
ENST00000524368 (HOXA10-004) 27171378-27172963 processed_transcript
ENST00000613671 (HOXA10-201) 27170592-27174255 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006I0_0001ENSDARG00000001784ENSDART00000003506ENSDARG00000036231ENSDART00000052633ENSDART00000080466ENSDART00000129600ENSDART00000135423ENSDART00000137735ENSDART00000138905ENSDART00000144019ENSDART00000146993ENSDART00000147360CIL_0006I0_0002ENSG00000078399ENST00000343483ENST00000396345ENST00000465941ENST00000487384ENST00000489695ENST00000497089ENSG00000253293ENST00000283921ENST00000396344ENST00000519593ENST00000521421ENST00000524368ENST00000613671
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006I0_0001ENSDARG00000001784ENSDART00000003506ENSDARG00000036231ENSDART00000052633ENSDART00000080466ENSDART00000129600ENSDART00000137735ENSDART00000144019ENSDART00000146993CIL_0006I0_0002ENSG00000078399ENST00000343483ENST00000396345ENST00000487384ENST00000489695ENST00000497089ENSG00000253293ENST00000283921ENST00000396344ENST00000524368ENST00000613671
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001784 ENSDART00000003506 N/A N/A N/A 1.480±0.00 N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A
ENSDARG00000036231 ENSDART00000052633 N/A N/A N/A N/A N/A N/A 0.134±0.08 2.386±0.88 N/A N/A N/A N/A N/A N/A
ENSDART00000080466 N/A N/A N/A 1.068±0.44 N/A N/A 0.529±0.00 0.966±0.00 0.036±0.00 N/A 1.499±0.00 N/A N/A N/A
ENSDART00000129600 N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137735 N/A N/A N/A N/A N/A N/A 0.277±0.03 N/A 0.117±0.00 N/A N/A N/A N/A N/A
ENSDART00000138905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144019 N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146993 N/A N/A N/A 0.267±0.03 N/A N/A 0.112±0.07 0.364±0.00 0.046±0.00 N/A N/A N/A N/A N/A
ENSDART00000147360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078399 ENST00000343483 N/A 3.169±0.00 0.717±0.00 N/A 2.712±0.00 3.199±1.78 N/A 10.255±0.00 0.764±0.00 N/A 2.744±1.69 N/A 1.517±0.00 0.602±0.47
ENST00000396345 N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A 0.851±0.00
ENST00000465941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487384 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A
ENST00000489695 N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497089 N/A N/A 1.079±0.00 N/A 1.808±0.00 N/A 0.078±0.00 6.101±0.00 N/A 0.047±0.00 N/A N/A 2.480±0.00 N/A
ENSG00000253293 ENST00000283921 2.913±0.00 N/A 0.509±0.00 N/A 1.654±0.00 2.463±1.22 N/A N/A 1.472±0.00 N/A 3.086±1.01 N/A 1.758±0.78 N/A
ENST00000396344 N/A N/A 1.030±0.00 N/A 2.107±0.00 N/A N/A N/A 2.837±0.00 0.134±0.00 3.325±0.00 2.416±0.97 2.881±0.00 N/A
ENST00000519593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524368 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 9.179±0.00 N/A 3.116±0.12 N/A
ENST00000613671 7.341±0.00 4.857±0.00 N/A 0.007±0.00 10.391±0.00 12.047±0.00 0.015±0.00 4.003±0.00 2.439±0.00 N/A 6.037±3.64 1.969±1.47 1.915±0.08 1.362±1.15

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