C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeo box A3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000146993 hoxa3a-001 ENSDARG00000036231 7955 + 19:19243182-19245990 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000146993
Transcript ID Brain Heart Kidney Liver
ENSDART00000146993 0.267±0.03 0.112±0.07 0.364±0.00 0.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0006 UCNEbase 19:19094506-19320701
CIL_0006I0 CIL_0006I0_0001 CGP 19:19213175-19227976

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317201 HOXA3-002 protein_coding Homo_sapiens 0.00001 57
ENST00000396352 HOXA3-001 protein_coding Homo_sapiens 0.00002 57
ENST00000612286 HOXA3-201 protein_coding Homo_sapiens 0.00002 57

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