C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036338 vps11 7955 - 10:30642285-30659812 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052787 vps11-001 30642285-30659812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052787
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052787 9.357±6.82 4.309±3.26 2.888±2.58 0.360±0.00 2.896±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MF CIL_0003MF_0001 CGP 10:30642285-30682722

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IMP liver development
GO:0003406 IMP retinal pigment epithelium development
GO:0003407 IMP neural retina development
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0008270 IEA zinc ion binding
GO:0010507 IMP negative regulation of autophagy
GO:0016192 IEA vesicle-mediated transport
GO:0030318 IMP melanocyte differentiation
GO:0046872 IEA metal ion binding
GO:0048794 IMP swim bladder development
GO:0060036 IMP notochord cell vacuolation
GO:1902362 IMP melanocyte apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000160695 VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae) protein_coding Homo_sapiens
ENSMUSG00000032127 Vps11 vacuolar protein sorting 11 (yeast) protein_coding Mus_musculus

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