C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003MF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000036338-ENSDARG00000013670 CGP 7955 10:30642285-30682722
GeneTranscriptPositionBiotype
ENSDARG00000013670 (hyou1)
hypoxia up-regulated 1 		ENSDART00000100032 (hyou1-001) 30661376-30682722 protein_coding
ENSDART00000149472 (hyou1-002) 30672893-30677160 retained_intron
ENSDARG00000036338 (vps11)
vacuolar protein sorting 11 		ENSDART00000052787 (vps11-001) 30642285-30659812 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003MF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032127-ENSMUSG00000032115 CGP 10090 9:44348106-44392369
GeneTranscriptPositionBiotype
ENSMUSG00000032115 (Hyou1)
hypoxia up-regulated 1 		ENSMUST00000066601 (Hyou1-001) 44379490-44392369 protein_coding
ENSMUST00000159473 (Hyou1-007) 44380529-44384148 protein_coding
ENSMUST00000160112 (Hyou1-005) 44379584-44386070 retained_intron
ENSMUST00000160902 (Hyou1-003) 44379623-44391102 protein_coding
ENSMUST00000161147 (Hyou1-008) 44390661-44391312 retained_intron
ENSMUST00000161318 (Hyou1-002) 44379573-44392363 protein_coding
ENSMUST00000161537 (Hyou1-004) 44379557-44390736 retained_intron
ENSMUST00000162560 (Hyou1-006) 44379546-44391523 nonsense_mediated_decay
ENSMUSG00000032127 (Vps11)
vacuolar protein sorting 11 (yeast) 		ENSMUST00000034644 (Vps11-201) 44348106-44361670 protein_coding
ENSMUSG00000060467 (Gm10080)
predicted gene 10080 		ENSMUST00000075585 (Gm10080-201) 44374595-44375209 pseudogene
ENSMUSG00000088028 (Gm22141)
predicted gene, 22141 		ENSMUST00000157403 (Gm22141-201) 44363452-44363728 misc_RNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MF_0001ENSDARG00000013670ENSDART00000100032ENSDART00000149472ENSDARG00000036338ENSDART00000052787CIL_0003MF_0002ENSMUSG00000032115ENSMUST00000066601ENSMUST00000159473ENSMUST00000160112ENSMUST00000160902ENSMUST00000161147ENSMUST00000161318ENSMUST00000161537ENSMUST00000162560ENSMUSG00000032127ENSMUST00000034644ENSMUSG00000060467ENSMUST00000075585ENSMUSG00000088028ENSMUST00000157403
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MF_0001ENSDARG00000013670ENSDART00000100032ENSDARG00000036338ENSDART00000052787CIL_0003MF_0002ENSMUSG00000032115ENSMUST00000066601ENSMUST00000159473ENSMUST00000160902ENSMUST00000161318ENSMUST00000162560ENSMUSG00000032127ENSMUST00000034644ENSMUSG00000060467ENSMUST00000075585ENSMUSG00000088028ENSMUST00000157403
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013670 ENSDART00000100032 N/A N/A N/A 8.359±2.12 N/A N/A 10.830±3.19 71.724±12.75 3.871±0.00 N/A 3.829±0.00 N/A N/A N/A
ENSDART00000149472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000036338 ENSDART00000052787 N/A N/A N/A 9.357±6.82 N/A N/A 4.309±3.26 2.888±2.58 0.360±0.00 N/A 2.896±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032115 ENSMUST00000066601 20.169±9.07 10.699±3.24 13.765±2.15 16.484±1.73 10.376±4.00 14.743±3.91 7.763±3.67 14.352±2.52 16.291±8.74 19.273±2.61 3.389±1.02 34.085±4.11 43.913±23.36 29.143±11.11
ENSMUST00000159473 N/A 31.471±4.49 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160902 N/A N/A N/A 29.436±0.00 N/A N/A N/A N/A N/A N/A 1.178±0.00 118.228±0.00 142.036±17.12 48.266±0.00
ENSMUST00000161147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161318 N/A 8.035±2.28 2.389±0.00 3.627±0.00 N/A 6.559±1.30 1.162±0.00 4.026±1.12 7.782±5.31 N/A 0.993±0.11 13.797±4.29 25.024±12.64 10.356±0.92
ENSMUST00000161537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162560 N/A N/A N/A 28.633±0.00 N/A N/A N/A N/A N/A N/A N/A 54.061±0.00 167.271±0.95 N/A
ENSMUSG00000032127 ENSMUST00000034644 15.744±1.66 23.700±2.92 8.846±0.58 18.250±8.44 11.246±1.46 8.306±0.68 5.613±0.64 15.377±1.49 8.318±1.34 11.461±0.63 8.388±0.53 18.628±3.26 16.771±5.59 10.032±0.82
ENSMUSG00000060467 ENSMUST00000075585 4.075±0.70 0.365±0.14 1.921±1.26 0.774±0.44 1.085±0.40 1.038±0.55 0.521±0.24 1.109±0.38 1.056±1.51 1.435±0.52 0.110±0.01 1.762±1.11 0.224±0.08 0.222±0.10
ENSMUSG00000088028 ENSMUST00000157403 N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A

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