C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member C2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000037517 slc35c2 7955 + 23:20719938-20800504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000054641 slc35c2-201 20720024-20800498 protein_coding
  ENSDART00000102963 slc35c2-202 20720024-20800498 protein_coding
  ENSDART00000109899 slc35c2-002 20720098-20732563 protein_coding
  ENSDART00000132920 slc35c2-001 20719938-20800504 protein_coding
  ENSDART00000137294 slc35c2-004 20737455-20759145 processed_transcript
  ENSDART00000140219 slc35c2-003 20720242-20727639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000054641ENSDART00000102963ENSDART00000109899ENSDART00000132920
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000054641 N/A 0.399±0.25 N/A 0.053±0.00 0.715±0.00
ENSDART00000102963 N/A 0.179±0.00 N/A N/A N/A
ENSDART00000109899 1.513±1.19 2.537±0.55 4.767±1.38 1.375±0.00 N/A
ENSDART00000132920 N/A 0.243±0.00 0.552±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101203 COL20A1 collagen, type XX, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000016356 Col20a1 collagen, type XX, alpha 1 protein_coding Mus_musculus

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