C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 6 (neurotransmitter transporter, GABA), member 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000039647 slc6a1b 7955 - 11:984251-1011632 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017551 slc6a1b-201 984251-1010481 protein_coding
  ENSDART00000057952 slc6a1b-202 985952-1011632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000017551ENSDART00000057952
Transcript ID Brain Heart Kidney Muscle
ENSDART00000017551 74.799±2.87 0.065±0.04 0.132±0.02 0.883±0.00
ENSDART00000057952 35.503±0.00 N/A N/A 1.083±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005332 IEA gamma-aminobutyric acid:sodium symporter activity
GO:0005887 IEA integral to plasma membrane
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000157103 SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1 protein_coding Homo_sapiens
ENSMUSG00000030310 Slc6a1 solute carrier family 6 (neurotransmitter transporter, GABA), member 1 protein_coding Mus_musculus

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