C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nibrin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000040303 nbn 7955 + 16:26077211-26114768 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000058974 nbn-001 26077214-26114768 protein_coding
  ENSDART00000131238 nbn-002 26077211-26112087 protein_coding
  ENSDART00000149287 nbn-003 26077213-26093904 nonsense_mediated_decay

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000058974ENSDART00000131238
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000058974 1.573±0.00 0.916±0.46 5.724±0.00 N/A 1.107±0.00
ENSDART00000131238 N/A 1.047±0.54 1.186±0.00 0.178±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015K CIL_00015K_0001 CGP 16:26077211-26124775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000781 IEA chromosome, telomeric region
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006281 IEA DNA repair
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0007126 IEA meiosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000104320 NBN nibrin protein_coding Homo_sapiens
ENSMUSG00000028224 Nbn nibrin protein_coding Mus_musculus

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