C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 47
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000040536 TRIM47 (21 of 90) 7955 - 15:40237624-40240226 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000075909 TRIM47 (21 of 90)-201 40237640-40240226 protein_coding
  ENSDART00000154113 TRIM47 (21 of 90)-001 40237624-40240226 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000075909ENSDART00000154113
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000075909 0.332±0.05 1.276±0.35 0.839±0.00 0.105±0.00 0.121±0.00
ENSDART00000154113 N/A 0.725±0.03 0.625±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132481 TRIM47 tripartite motif containing 47 protein_coding Homo_sapiens
ENSMUSG00000020773 Trim47 tripartite motif-containing 47 protein_coding Mus_musculus

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