C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: replication termination factor 2 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000040607 rtfdc1 7955 + 6:56048378-56110829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000059438 rtfdc1-001 56048378-56110829 protein_coding
  ENSDART00000154406 rtfdc1-004 56103290-56110033 retained_intron
  ENSDART00000156446 rtfdc1-003 56103047-56110457 processed_transcript
  ENSDART00000157040 rtfdc1-002 56048422-56110001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000059438ENSDART00000154406ENSDART00000156446ENSDART00000157040
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000059438 7.043±3.35 15.933±9.33 8.045±2.14 0.953±0.00 7.215±0.00
ENSDART00000154406 3.547±0.00 N/A N/A N/A N/A
ENSDART00000156446 N/A N/A 35.876±0.00 N/A 2.142±0.00
ENSDART00000157040 N/A N/A 7.644±0.00 0.391±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015M CIL_00015M_0001 CGP 6:56048378-56110829

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000022277 RTFDC1 replication termination factor 2 domain containing 1 protein_coding Homo_sapiens
ENSMUSG00000027502 Rtfdc1 replication termination factor 2 domain containing 1 protein_coding Mus_musculus

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