C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 domain containing 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000041190 7955 - 16:39881005-39914131 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000058637 39881005-39914131 protein_coding
  ENSDART00000122760 39881024-39913907 protein_coding
  ENSDART00000133326 39885896-39902791 protein_coding
  ENSDART00000133689 39881453-39900699 protein_coding
  ENSDART00000142780 39885884-39894974 protein_coding
  ENSDART00000143427 39892002-39901123 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000058637ENSDART00000122760ENSDART00000133689ENSDART00000142780ENSDART00000143427
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000058637 0.257±0.00 3.843±0.00 7.534±4.73 N/A N/A
ENSDART00000122760 0.417±0.34 3.662±2.04 4.913±0.00 0.214±0.00 0.809±0.00
ENSDART00000133689 0.905±0.00 4.638±0.00 N/A N/A 0.343±0.00
ENSDART00000142780 N/A N/A N/A 0.179±0.00 N/A
ENSDART00000143427 0.930±0.23 4.850±0.86 N/A N/A 0.680±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JS CIL_0002JS_0001 CGP 16:39843908-39914131
CIL_0000FN CIL_0000FN_0001 CGP 16:39881005-39935631

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000214193 SH3D21 SH3 domain containing 21 protein_coding Homo_sapiens
ENSMUSG00000073758 Sh3d21 SH3 domain containing 21 protein_coding Mus_musculus

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