C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 domain containing 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073758 Sh3d21 10090 - 4:126150602-126163491 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094760 Sh3d21-003 126150602-126162626 protein_coding
  ENSMUST00000097891 Sh3d21-001 126150602-126163491 protein_coding
  ENSMUST00000141638 Sh3d21-005 126151557-126162656 processed_transcript
  ENSMUST00000142891 Sh3d21-002 126150602-126162665 processed_transcript
  ENSMUST00000152402 Sh3d21-004 126150608-126162601 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094760ENSMUST00000097891ENSMUST00000141638ENSMUST00000142891ENSMUST00000152402
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094760 0.433±0.09 N/A 1.827±0.22 0.229±0.07 0.400±0.21 N/A 0.420±0.10 0.909±0.23 0.119±0.02 1.231±0.22 0.296±0.12 1.309±1.26 2.949±4.05 154.351±41.89
ENSMUST00000097891 0.608±0.20 0.459±0.34 1.775±0.23 0.089±0.04 0.415±0.23 9.429±1.66 0.183±0.06 1.355±0.24 0.209±0.17 0.973±0.28 0.192±0.09 0.563±0.36 5.092±5.45 N/A
ENSMUST00000141638 0.368±0.00 N/A N/A N/A 0.271±0.00 N/A 0.173±0.03 0.532±0.00 N/A 1.016±0.22 N/A 0.665±0.43 N/A N/A
ENSMUST00000142891 0.325±0.02 N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A 0.731±0.23 0.086±0.00 0.186±0.00 N/A N/A
ENSMUST00000152402 0.320±0.00 N/A 0.991±0.05 0.097±0.03 0.592±0.00 2.278±0.00 0.155±0.00 0.518±0.17 0.217±0.10 N/A 0.185±0.06 0.584±0.37 3.488±2.64 40.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JS CIL_0002JS_0002 CGP 4:126147744-126163491
CIL_0000FN CIL_0000FN_0002 CGP 4:126150602-126202760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041190 SH3 domain containing 21 protein_coding Danio_rerio
ENSG00000214193 SH3D21 SH3 domain containing 21 protein_coding Homo_sapiens

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