C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000FN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041190-ENSDARG00000040095 CGP 7955 16:39881005-39935631
GeneTranscriptPositionBiotype
ENSDARG00000041190 ()
SH3 domain containing 21 		ENSDART00000058637 () 39881005-39914131 protein_coding
ENSDART00000122760 () 39881024-39913907 protein_coding
ENSDART00000133326 () 39885896-39902791 protein_coding
ENSDART00000133689 () 39881453-39900699 protein_coding
ENSDART00000142780 () 39885884-39894974 protein_coding
ENSDART00000143427 () 39892002-39901123 retained_intron
CIL_0000FN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073758-ENSMUSG00000043962 CGP 10090 4:126150602-126202760
GeneTranscriptPositionBiotype
ENSMUSG00000043962 (Thrap3)
thyroid hormone receptor associated protein 3 		ENSMUST00000080919 (Thrap3-001) 126164082-126202760 protein_coding
ENSMUST00000106141 (Thrap3-013) 126186496-126202390 protein_coding
ENSMUST00000106142 (Thrap3-004) 126172843-126202589 protein_coding
ENSMUST00000123008 (Thrap3-010) 126180563-126194391 nonsense_mediated_decay
ENSMUST00000124327 (Thrap3-008) 126193916-126202670 processed_transcript
ENSMUST00000130334 (Thrap3-006) 126186484-126202647 protein_coding
ENSMUST00000130477 (Thrap3-009) 126186065-126202623 retained_intron
ENSMUST00000136157 (Thrap3-007) 126180791-126201117 protein_coding
ENSMUST00000140390 (Thrap3-002) 126164086-126168449 processed_transcript
ENSMUST00000142125 (Thrap3-005) 126186490-126202376 protein_coding
ENSMUST00000151728 (Thrap3-003) 126178774-126202612 retained_intron
ENSMUST00000154702 (Thrap3-011) 126165555-126167476 processed_transcript
ENSMUST00000163176 (Thrap3-014) 126167048-126173527 nonsense_mediated_decay
ENSMUST00000163306 (Thrap3-017) 126175366-126178526 protein_coding
ENSMUST00000163459 (Thrap3-015) 126165541-126175447 protein_coding
ENSMUST00000168568 (Thrap3-012) 126186246-126202659 retained_intron
ENSMUST00000169403 (Thrap3-018) 126180800-126202589 protein_coding
ENSMUST00000169855 (Thrap3-016) 126178788-126180147 processed_transcript
ENSMUSG00000073758 (Sh3d21)
SH3 domain containing 21 		ENSMUST00000094760 (Sh3d21-003) 126150602-126162626 protein_coding
ENSMUST00000097891 (Sh3d21-001) 126150602-126163491 protein_coding
ENSMUST00000141638 (Sh3d21-005) 126151557-126162656 processed_transcript
ENSMUST00000142891 (Sh3d21-002) 126150602-126162665 processed_transcript
ENSMUST00000152402 (Sh3d21-004) 126150608-126162601 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FN_0001ENSDARG00000041190ENSDART00000058637ENSDART00000122760ENSDART00000133326ENSDART00000133689ENSDART00000142780ENSDART00000143427CIL_0000FN_0002ENSMUSG00000043962ENSMUST00000080919ENSMUST00000106141ENSMUST00000106142ENSMUST00000123008ENSMUST00000124327ENSMUST00000130334ENSMUST00000130477ENSMUST00000136157ENSMUST00000140390ENSMUST00000142125ENSMUST00000151728ENSMUST00000154702ENSMUST00000163176ENSMUST00000163306ENSMUST00000163459ENSMUST00000168568ENSMUST00000169403ENSMUST00000169855ENSMUSG00000073758ENSMUST00000094760ENSMUST00000097891ENSMUST00000141638ENSMUST00000142891ENSMUST00000152402
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FN_0001ENSDARG00000041190ENSDART00000058637ENSDART00000122760ENSDART00000133689ENSDART00000142780ENSDART00000143427CIL_0000FN_0002ENSMUSG00000043962ENSMUST00000080919ENSMUST00000140390ENSMUST00000151728ENSMUSG00000073758ENSMUST00000094760ENSMUST00000097891ENSMUST00000141638ENSMUST00000142891ENSMUST00000152402
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041190 ENSDART00000058637 N/A N/A N/A 0.257±0.00 N/A N/A 3.843±0.00 7.534±4.73 N/A N/A N/A N/A N/A N/A
ENSDART00000122760 N/A N/A N/A 0.417±0.34 N/A N/A 3.662±2.04 4.913±0.00 0.214±0.00 N/A 0.809±0.00 N/A N/A N/A
ENSDART00000133326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133689 N/A N/A N/A 0.905±0.00 N/A N/A 4.638±0.00 N/A N/A N/A 0.343±0.00 N/A N/A N/A
ENSDART00000142780 N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A
ENSDART00000143427 N/A N/A N/A 0.930±0.23 N/A N/A 4.850±0.86 N/A N/A N/A 0.680±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043962 ENSMUST00000080919 6.465±1.59 11.254±5.78 15.428±5.87 17.201±5.16 6.832±3.91 8.038±5.29 5.434±0.00 3.551±1.17 13.043±12.23 9.054±3.72 10.580±4.21 16.206±15.31 25.373±11.61 13.648±5.73
ENSMUST00000106141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140390 5.427±2.37 5.477±1.31 11.610±0.37 6.435±0.00 6.590±1.46 6.439±1.58 2.539±0.00 3.681±0.80 5.017±3.18 7.003±1.95 N/A 7.755±2.54 11.178±0.01 N/A
ENSMUST00000142125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.989±2.48 9.872±0.00 N/A
ENSMUST00000154702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000073758 ENSMUST00000094760 0.433±0.09 N/A 1.827±0.22 0.229±0.07 0.400±0.21 N/A 0.420±0.10 0.909±0.23 0.119±0.02 1.231±0.22 0.296±0.12 1.309±1.26 2.949±4.05 154.351±41.89
ENSMUST00000097891 0.608±0.20 0.459±0.34 1.775±0.23 0.089±0.04 0.415±0.23 9.429±1.66 0.183±0.06 1.355±0.24 0.209±0.17 0.973±0.28 0.192±0.09 0.563±0.36 5.092±5.45 N/A
ENSMUST00000141638 0.368±0.00 N/A N/A N/A 0.271±0.00 N/A 0.173±0.03 0.532±0.00 N/A 1.016±0.22 N/A 0.665±0.43 N/A N/A
ENSMUST00000142891 0.325±0.02 N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A 0.731±0.23 0.086±0.00 0.186±0.00 N/A N/A
ENSMUST00000152402 0.320±0.00 N/A 0.991±0.05 0.097±0.03 0.592±0.00 2.278±0.00 0.155±0.00 0.518±0.17 0.217±0.10 N/A 0.185±0.06 0.584±0.37 3.488±2.64 40.071±0.00

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