C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal recognition particle 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042851 srp9 7955 + 20:36648415-36651177 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000062895 srp9-002 36648499-36651141 protein_coding
  ENSDART00000149171 srp9-001 36648415-36651177 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000062895ENSDART00000149171
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000062895 20.551±11.09 5.858±0.00 10.693±5.47 0.867±0.00 0.829±0.00
ENSDART00000149171 17.536±8.07 10.484±1.03 14.751±0.00 3.175±0.00 2.337±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BU CIL_0000BU_0001 CGP 20:36444555-36651177
CIL_0000BT CIL_0000BT_0001 CGP 20:36648415-36662787

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005737 IEA cytoplasm
GO:0005786 IEA signal recognition particle, endoplasmic reticulum targeting
GO:0006614 IEA SRP-dependent cotranslational protein targeting to membrane
GO:0008312 IEA 7S RNA binding
GO:0030529 IEA ribonucleoprotein complex
GO:0045900 IEA negative regulation of translational elongation
GO:0048500 IEA signal recognition particle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000143742 SRP9 signal recognition particle 9kDa protein_coding Homo_sapiens
ENSMUSG00000026511 Srp9 signal recognition particle 9 protein_coding Mus_musculus

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