C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000BT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042851-ENSDARG00000042854 CGP 7955 20:36648415-36662787
GeneTranscriptPositionBiotype
ENSDARG00000042851 (srp9)
signal recognition particle 9 		ENSDART00000062895 (srp9-002) 36648499-36651141 protein_coding
ENSDART00000149171 (srp9-001) 36648415-36651177 protein_coding
ENSDARG00000042854 (ephx1)
epoxide hydrolase 1, microsomal (xenobiotic) 		ENSDART00000062898 (ephx1-001) 36652667-36662787 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000BT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143742-ENSG00000143819 CGP 9606 1:225777813-225845563
GeneTranscriptPositionBiotype
ENSG00000143742 (SRP9)
signal recognition particle 9kDa 		ENST00000304786 (SRP9-001) 225777829-225790466 protein_coding
ENST00000366838 (SRP9-003) 225777935-225789524 protein_coding
ENST00000366839 (SRP9-002) 225777837-225790466 protein_coding
ENST00000619790 (SRP9-201) 225777813-225786969 protein_coding
ENSG00000143819 (EPHX1)
epoxide hydrolase 1, microsomal (xenobiotic) 		ENST00000272167 (EPHX1-201) 225810095-225845559 protein_coding
ENST00000366837 (EPHX1-001) 225825354-225845563 protein_coding
ENST00000445856 (EPHX1-002) 225810092-225838773 protein_coding
ENST00000448202 (EPHX1-003) 225810134-225838697 protein_coding
ENST00000467015 (EPHX1-004) 225828843-225832163 processed_transcript
ENST00000614058 (EPHX1-202) 225810412-225845559 protein_coding
ENSG00000196187 (TMEM63A)
transmembrane protein 63A 		ENST00000366835 (TMEM63A-001) 225845536-225882369 protein_coding
ENST00000436966 (TMEM63A-008) 225871092-225877679 protein_coding
ENST00000474478 (TMEM63A-002) 225859663-225866211 processed_transcript
ENST00000482753 (TMEM63A-004) 225847139-225848988 processed_transcript
ENST00000483779 (TMEM63A-006) 225862540-225866410 retained_intron
ENST00000487817 (TMEM63A-007) 225871574-225877494 processed_transcript
ENST00000487971 (TMEM63A-005) 225856704-225859541 processed_transcript
ENST00000496025 (TMEM63A-003) 225846576-225847465 processed_transcript
ENST00000537914 (TMEM63A-201) 225860724-225866748 protein_coding
ENSG00000234112 (RP11-145A3.4)
 ENST00000434499 (RP11-145A3.4-001) 225803148-225803448 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BT_0001ENSDARG00000042851ENSDART00000062895ENSDART00000149171ENSDARG00000042854ENSDART00000062898CIL_0000BT_0002ENSG00000143742ENST00000304786ENST00000366838ENST00000366839ENST00000619790ENSG00000143819ENST00000272167ENST00000366837ENST00000445856ENST00000448202ENST00000467015ENST00000614058ENSG00000196187ENST00000366835ENST00000436966ENST00000474478ENST00000482753ENST00000483779ENST00000487817ENST00000487971ENST00000496025ENST00000537914ENSG00000234112ENST00000434499
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BT_0001ENSDARG00000042851ENSDART00000062895ENSDART00000149171ENSDARG00000042854ENSDART00000062898CIL_0000BT_0002ENSG00000143742ENST00000304786ENST00000366839ENST00000619790ENSG00000143819ENST00000272167ENST00000366837ENST00000445856ENST00000614058ENSG00000196187ENST00000366835ENST00000474478ENST00000537914ENSG00000234112ENST00000434499
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042851 ENSDART00000062895 N/A N/A N/A 20.551±11.09 N/A N/A 5.858±0.00 10.693±5.47 0.867±0.00 N/A 0.829±0.00 N/A N/A N/A
ENSDART00000149171 N/A N/A N/A 17.536±8.07 N/A N/A 10.484±1.03 14.751±0.00 3.175±0.00 N/A 2.337±0.00 N/A N/A N/A
ENSDARG00000042854 ENSDART00000062898 N/A N/A N/A 5.016±0.00 N/A N/A 12.907±5.62 26.190±9.98 3.433±0.00 N/A 3.272±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143742 ENST00000304786 30.017±0.00 31.774±0.00 14.435±0.00 48.510±3.58 35.205±3.32 37.513±8.08 30.839±13.36 50.044±19.35 33.898±11.74 26.969±5.41 17.705±11.12 46.343±8.11 32.171±5.59 33.458±14.31
ENST00000366838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366839 5.918±0.00 9.701±0.00 N/A 15.089±9.57 N/A 5.958±0.00 N/A 7.076±2.00 4.117±0.00 8.813±5.53 1.561±0.00 13.785±5.57 6.605±2.18 8.079±1.05
ENST00000619790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.882±0.00 N/A N/A N/A
ENSG00000143819 ENST00000272167 87.049±0.00 81.316±0.00 5.344±0.00 40.659±32.91 147.894±139.74 39.836±28.31 18.032±15.45 88.413±0.00 212.646±199.25 66.636±56.11 34.112±30.66 113.299±98.57 28.834±2.70 76.963±49.85
ENST00000366837 N/A N/A N/A N/A N/A N/A N/A 174.828±0.00 160.208±0.00 N/A N/A N/A N/A N/A
ENST00000445856 70.900±0.00 N/A N/A N/A 210.126±0.00 N/A N/A N/A N/A N/A N/A 191.548±0.00 N/A N/A
ENST00000448202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614058 N/A N/A 3.804±0.00 N/A N/A N/A 1.456±0.00 N/A N/A N/A 3.044±0.00 N/A N/A N/A
ENSG00000196187 ENST00000366835 6.708±0.00 11.121±0.00 2.298±0.00 15.836±0.00 4.685±0.00 5.991±1.13 3.332±2.46 15.709±0.00 2.922±0.00 13.328±0.00 0.840±0.00 13.280±4.84 8.663±3.75 3.274±0.00
ENST00000436966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474478 N/A N/A N/A N/A 2.259±0.00 1.719±0.00 N/A N/A N/A 1.592±0.00 N/A 1.393±0.00 N/A N/A
ENST00000482753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537914 N/A N/A N/A N/A 6.899±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234112 ENST00000434499 0.173±0.00 N/A N/A 0.224±0.00 N/A 0.093±0.00 0.176±0.00 N/A N/A 0.797±0.00 N/A N/A N/A 0.154±0.07

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