C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: si:dkey-239i20.2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000043518 si:dkey-239i20.2 7955 - 20:15090312-15096721 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000063892 si:dkey-239i20.2-001 15090312-15096721 protein_coding
  ENSDART00000122592 si:dkey-239i20.2-003 15090616-15095639 protein_coding
  ENSDART00000125887 si:dkey-239i20.2-002 15090947-15091945 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000063892ENSDART00000122592ENSDART00000125887
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000063892 0.124±0.00 0.621±0.27 6.157±0.97 N/A N/A
ENSDART00000122592 0.180±0.09 1.291±0.58 N/A 0.684±0.00 0.764±0.00
ENSDART00000125887 0.436±0.00 0.526±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CU CIL_0005CU_0001 CGP 20:15030959-15096721
CIL_000285 CIL_000285_0002 CGP 20:15090312-15110570

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0004499 IEA N,N-dimethylaniline monooxygenase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0016020 IEA membrane
GO:0016491 IEA oxidoreductase activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0050661 IEA NADP binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000007933 FMO3 flavin containing monooxygenase 3 protein_coding Homo_sapiens
ENSG00000010932 FMO1 flavin containing monooxygenase 1 protein_coding Homo_sapiens
ENSG00000076258 FMO4 flavin containing monooxygenase 4 protein_coding Homo_sapiens
ENSG00000094963 FMO2 flavin containing monooxygenase 2 (non-functional) protein_coding Homo_sapiens
ENSG00000117507 FMO6P flavin containing monooxygenase 6 pseudogene protein_coding Homo_sapiens
ENSG00000131781 FMO5 flavin containing monooxygenase 5 protein_coding Homo_sapiens
ENSMUSG00000026560 Fmo9 flavin containing monooxygenase 9 protein_coding Mus_musculus
ENSMUSG00000026691 Fmo3 flavin containing monooxygenase 3 protein_coding Mus_musculus
ENSMUSG00000026692 Fmo4 flavin containing monooxygenase 4 protein_coding Mus_musculus
ENSMUSG00000028088 Fmo5 flavin containing monooxygenase 5 protein_coding Mus_musculus
ENSMUSG00000040170 Fmo2 flavin containing monooxygenase 2 protein_coding Mus_musculus
ENSMUSG00000040181 Fmo1 flavin containing monooxygenase 1 protein_coding Mus_musculus
ENSMUSG00000051081 Gm4847 predicted gene 4847 protein_coding Mus_musculus
ENSMUSG00000086056 Gm4846 predicted gene 4846 protein_coding Mus_musculus
ENSMUSG00000095576 Fmo6 flavin containing monooxygenase 6 protein_coding Mus_musculus

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