C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005CU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057583-ENSDARG00000043518 CGP 7955 20:15030959-15096721
GeneTranscriptPositionBiotype
ENSDARG00000043518 (si:dkey-239i20.2)
si:dkey-239i20.2 		ENSDART00000063892 (si:dkey-239i20.2-001) 15090312-15096721 protein_coding
ENSDART00000122592 (si:dkey-239i20.2-003) 15090616-15095639 protein_coding
ENSDART00000125887 (si:dkey-239i20.2-002) 15090947-15091945 processed_transcript
ENSDARG00000057583 (prrc2c)
proline-rich coiled-coil 2C 		ENSDART00000080289 (prrc2c-201) 15030959-15068467 protein_coding
ENSDART00000135212 (prrc2c-001) 15052475-15086473 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005CU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040225-ENSMUSG00000026692 CGP 10090 1:162670725-162813972
GeneTranscriptPositionBiotype
ENSMUSG00000026692 (Fmo4)
flavin containing monooxygenase 4 		ENSMUST00000028014 (Fmo4-201) 162793883-162812549 protein_coding
ENSMUST00000111525 (Fmo4-001) 162793883-162813672 protein_coding
ENSMUST00000140031 (Fmo4-002) 162802853-162813672 retained_intron
ENSMUST00000140274 (Fmo4-003) 162808285-162813972 protein_coding
ENSMUST00000144916 (Fmo4-004) 162807514-162813926 protein_coding
ENSMUSG00000040225 (Prrc2c)
proline-rich coiled-coil 2C 		ENSMUST00000028016 (Prrc2c-006) 162673402-162740550 protein_coding
ENSMUST00000182149 (Prrc2c-001) 162670725-162740495 protein_coding
ENSMUST00000182288 (Prrc2c-007) 162719892-162740497 retained_intron
ENSMUST00000182308 (Prrc2c-012) 162722905-162724868 retained_intron
ENSMUST00000182331 (Prrc2c-011) 162720545-162740350 protein_coding
ENSMUST00000182393 (Prrc2c-003) 162671788-162705192 protein_coding
ENSMUST00000182448 (Prrc2c-014) 162712802-162714016 retained_intron
ENSMUST00000182535 (Prrc2c-013) 162683738-162688189 retained_intron
ENSMUST00000182593 (Prrc2c-005) 162672889-162740481 protein_coding
ENSMUST00000182660 (Prrc2c-004) 162670727-162740556 protein_coding
ENSMUST00000183011 (Prrc2c-008) 162710534-162740404 protein_coding
ENSMUST00000183223 (Prrc2c-009) 162671785-162704766 protein_coding
ENSMUST00000183286 (Prrc2c-010) 162730257-162740487 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CU_0001ENSDARG00000043518ENSDART00000063892ENSDART00000122592ENSDART00000125887ENSDARG00000057583ENSDART00000080289ENSDART00000135212CIL_0005CU_0002ENSMUSG00000026692ENSMUST00000028014ENSMUST00000111525ENSMUST00000140031ENSMUST00000140274ENSMUST00000144916ENSMUSG00000040225ENSMUST00000028016ENSMUST00000182149ENSMUST00000182288ENSMUST00000182308ENSMUST00000182331ENSMUST00000182393ENSMUST00000182448ENSMUST00000182535ENSMUST00000182593ENSMUST00000182660ENSMUST00000183011ENSMUST00000183223ENSMUST00000183286
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CU_0001ENSDARG00000043518ENSDART00000063892ENSDART00000122592ENSDART00000125887ENSDARG00000057583ENSDART00000080289CIL_0005CU_0002ENSMUSG00000026692ENSMUST00000028014ENSMUST00000111525ENSMUST00000140031ENSMUST00000140274ENSMUST00000144916ENSMUSG00000040225ENSMUST00000028016ENSMUST00000182149ENSMUST00000182393ENSMUST00000182593ENSMUST00000182660ENSMUST00000183223
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043518 ENSDART00000063892 N/A N/A N/A 0.124±0.00 N/A N/A 0.621±0.27 6.157±0.97 N/A N/A N/A N/A N/A N/A
ENSDART00000122592 N/A N/A N/A 0.180±0.09 N/A N/A 1.291±0.58 N/A 0.684±0.00 N/A 0.764±0.00 N/A N/A N/A
ENSDART00000125887 N/A N/A N/A 0.436±0.00 N/A N/A 0.526±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000057583 ENSDART00000080289 N/A N/A N/A 5.296±1.94 N/A N/A 1.775±2.17 2.095±0.74 0.663±0.00 N/A 2.460±0.00 N/A N/A N/A
ENSDART00000135212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026692 ENSMUST00000028014 0.134±0.00 0.136±0.08 N/A 0.014±0.00 0.302±0.19 0.258±0.00 0.064±0.01 N/A N/A N/A 0.161±0.08 0.102±0.06 2.924±2.61 0.132±0.06
ENSMUST00000111525 0.126±0.00 N/A N/A N/A 0.287±0.00 0.510±0.26 N/A N/A N/A N/A N/A N/A 13.938±1.83 N/A
ENSMUST00000140031 N/A 0.184±0.01 N/A N/A N/A 0.537±0.00 N/A N/A N/A N/A N/A 0.124±0.04 0.036±0.00 N/A
ENSMUST00000140274 N/A 0.339±0.00 N/A 0.095±0.00 N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.169±0.05 0.145±0.08 0.148±0.00
ENSMUST00000144916 0.199±0.07 0.313±0.10 N/A N/A 0.257±0.00 0.578±0.00 N/A N/A N/A N/A N/A 0.119±0.04 0.247±0.00 0.109±0.00
ENSMUSG00000040225 ENSMUST00000028016 3.038±1.50 5.339±3.53 2.487±0.00 13.749±4.73 5.933±1.76 3.394±1.13 N/A 2.042±0.53 1.576±0.52 5.493±0.90 1.155±0.00 5.365±3.28 8.926±3.76 3.289±1.47
ENSMUST00000182149 0.888±0.00 N/A 1.159±0.00 N/A N/A N/A N/A N/A 0.766±0.02 1.849±0.00 0.838±0.04 N/A 2.931±1.27 N/A
ENSMUST00000182288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182393 5.155±2.16 4.679±0.44 4.096±0.96 8.182±2.74 5.023±1.34 5.637±1.04 2.179±0.26 3.544±0.94 1.640±0.55 6.465±0.80 1.287±0.37 5.550±2.28 4.470±1.19 3.250±0.13
ENSMUST00000182448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182593 2.911±0.23 N/A N/A N/A 2.445±0.00 N/A 1.199±0.00 N/A 1.230±0.00 N/A N/A 6.854±1.96 7.762±3.59 2.520±1.57
ENSMUST00000182660 N/A N/A N/A 2.451±1.27 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183223 6.223±2.02 14.472±4.74 4.050±0.19 7.302±2.39 10.253±4.08 8.171±2.75 3.576±0.94 5.067±0.57 3.168±1.19 10.267±1.91 1.638±0.29 11.999±4.81 8.519±3.56 4.394±0.58
ENSMUST00000183286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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