C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neurexin 3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000043746 nrxn3a 7955 - 17:16747762-17278055 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000064241 nrxn3a-201 16748762-16960491 protein_coding
  ENSDART00000088179 nrxn3a-202 16748762-17271594 protein_coding
  ENSDART00000109034 nrxn3a-203 17270168-17278052 protein_coding
  ENSDART00000153697 nrxn3a-003 16747762-16807048 protein_coding
  ENSDART00000154519 nrxn3a-002 16747762-16807048 nonsense_mediated_decay
  ENSDART00000155007 nrxn3a-006 17087463-17096032 retained_intron
  ENSDART00000155341 nrxn3a-005 17274528-17278055 processed_transcript
  ENSDART00000156391 nrxn3a-004 17098775-17100853 retained_intron
  ENSDART00000156928 nrxn3a-001 17087594-17278052 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000064241ENSDART00000088179ENSDART00000109034ENSDART00000153697ENSDART00000154519ENSDART00000156391ENSDART00000156928
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000064241 N/A 0.025±0.00 N/A 0.025±0.00 N/A
ENSDART00000088179 N/A N/A N/A 0.037±0.00 0.294±0.00
ENSDART00000109034 N/A 0.026±0.00 0.162±0.00 N/A N/A
ENSDART00000153697 N/A 0.046±0.00 0.129±0.00 0.021±0.00 N/A
ENSDART00000154519 14.099±0.01 0.166±0.05 N/A N/A 1.161±0.00
ENSDART00000156391 N/A 0.217±0.00 2.096±1.05 N/A N/A
ENSDART00000156928 N/A N/A 0.018±0.00 N/A 0.784±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OJ CIL_0007OJ_0003 UCNEbase 17:16743749-16749642

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000021645 NRXN3 neurexin 3 protein_coding Homo_sapiens
ENSMUSG00000066392 Nrxn3 neurexin III protein_coding Mus_musculus

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