C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: superoxide dismutase 1, soluble
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000043848 sod1 7955 - 10:26328825-26333884 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000064376 sod1-001 26328825-26333884 protein_coding
  ENSDART00000135058 sod1-002 26331589-26333789 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000064376
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000064376 78.680±47.82 51.041±44.10 60.072±78.92 30.333±0.00 35.053±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MO CIL_0000MO_0001 CGP 10:26207182-26333884
CIL_0000MH CIL_0000MH_0001 CGP 10:26328825-26351271

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004784 IEA superoxide dismutase activity
GO:0005507 IBA copper ion binding
GO:0005634 IBA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IBA mitochondrion
GO:0005829 IBA cytosol
GO:0006801 IEA superoxide metabolic process
GO:0008270 IBA zinc ion binding
GO:0009410 IDA response to xenobiotic stimulus
GO:0010038 IDA response to metal ion
GO:0016209 IEA antioxidant activity
GO:0016491 IEA oxidoreductase activity
GO:0019430 IBA removal of superoxide radicals
GO:0046872 IEA metal ion binding
GO:0051597 IDA response to methylmercury
GO:0055114 IEA oxidation-reduction process
GO:0070050 IMP neuron cellular homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000142168 SOD1 superoxide dismutase 1, soluble protein_coding Homo_sapiens
ENSMUSG00000022982 Sod1 superoxide dismutase 1, soluble protein_coding Mus_musculus

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