C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY-box containing gene 9b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000043923 sox9b 7955 - 3:63177826-63184481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000064500 sox9b-001 63177826-63184481 protein_coding
  ENSDART00000124464 sox9b-201 63179840-63184300 protein_coding
  ENSDART00000155048 sox9b-002 63181958-63184460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000064500ENSDART00000155048
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000064500 3.317±1.52 0.526±0.00 0.327±0.09 0.747±0.00 0.614±0.00
ENSDART00000155048 N/A 0.263±0.00 N/A N/A 0.376±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0030318 IMP melanocyte differentiation
GO:0030916 IGI otic vesicle formation
GO:0031016 IMP pancreas development
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0043049 IGI otic placode formation
GO:0048839 IMP inner ear development
GO:0050935 IMP iridophore differentiation
GO:0051216 IMP cartilage development
GO:0060041 IMP retina development in camera-type eye
GO:0061008 IMP hepaticobiliary system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000005513 SOX8 SRY (sex determining region Y)-box 8 protein_coding Homo_sapiens
ENSMUSG00000024176 Sox8 SRY (sex determining region Y)-box 8 protein_coding Mus_musculus

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