C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L13a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000044093 rpl13a 7955 + 17:24443248-24450993 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000064739 rpl13a-001 24443248-24446436 protein_coding
  ENSDART00000128758 rpl13a-201 24443351-24450993 protein_coding
  ENSDART00000132299 rpl13a-003 24443338-24444452 retained_intron
  ENSDART00000134571 rpl13a-006 24444856-24446075 retained_intron
  ENSDART00000134680 rpl13a-005 24443338-24444254 retained_intron
  ENSDART00000141942 rpl13a-004 24444017-24445020 retained_intron
  ENSDART00000145980 rpl13a-002 24443331-24446032 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000064739ENSDART00000128758ENSDART00000134571ENSDART00000141942ENSDART00000145980
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000064739 59.574±51.88 329.946±243.01 150.049±209.29 102.366±0.00 228.531±0.00
ENSDART00000128758 0.149±0.01 0.072±0.00 N/A N/A N/A
ENSDART00000134571 166.367±0.00 1329.300±0.00 N/A 295.779±0.00 397.481±0.00
ENSDART00000141942 N/A 0.756±0.00 0.580±0.12 N/A N/A
ENSDART00000145980 58.507±0.00 390.713±0.00 203.986±0.00 84.978±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015934 IEA large ribosomal subunit
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000142541 RPL13A ribosomal protein L13a protein_coding Homo_sapiens
ENSMUSG00000062083 Rpl13a-ps1 ribosomal protein 13A, pseudogene 1 protein_coding Mus_musculus
ENSMUSG00000074129 Rpl13a ribosomal protein L13A protein_coding Mus_musculus

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