C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: reticulon 4a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000044601 rtn4a 7955 - 6:6147827-6175266 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000081952 rtn4a-003 6147827-6171247 protein_coding
  ENSDART00000081966 rtn4a-001 6148200-6175266 protein_coding
  ENSDART00000124662 rtn4a-004 6148200-6165708 protein_coding
  ENSDART00000125918 rtn4a-002 6148200-6175266 protein_coding
  ENSDART00000126142 rtn4a-201 6148200-6175266 protein_coding
  ENSDART00000132350 rtn4a-005 6151579-6165619 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000081952ENSDART00000081966ENSDART00000124662
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000081952 N/A 0.646±0.00 14.476±3.04 N/A 263.372±0.00
ENSDART00000081966 32.823±8.94 21.251±1.27 56.704±0.00 16.504±0.00 N/A
ENSDART00000124662 93.235±34.71 28.407±28.55 25.193±21.03 13.185±0.00 78.840±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002040 IMP sprouting angiogenesis
GO:0003674 ND molecular_function
GO:0007409 IDA axonogenesis
GO:0007411 IMP axon guidance
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0048936 IMP peripheral nervous system neuron axonogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115310 RTN4 reticulon 4 protein_coding Homo_sapiens
ENSMUSG00000020458 Rtn4 reticulon 4 protein_coding Mus_musculus

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