C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: opsin 1 (cone pigments), long-wave-sensitive, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000044862 opn1lw1 7955 + 11:26411202-26413596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000065941 opn1lw1-001 26411202-26413596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000065941
Transcript ID Brain
ENSDART00000065941 0.167±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GD CIL_0007GD_0001 CGP 11:26411202-26416765

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0007165 IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007601 IEA visual perception
GO:0007602 IEA phototransduction
GO:0009416 IDA response to light stimulus
GO:0009648 IDA photoperiodism
GO:0009881 IEA photoreceptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0018298 IEA protein-chromophore linkage
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000102076 OPN1LW opsin 1 (cone pigments), long-wave-sensitive protein_coding Homo_sapiens
ENSG00000166160 OPN1MW2 opsin 1 (cone pigments), medium-wave-sensitive 2 protein_coding Homo_sapiens
ENSG00000268221 OPN1MW opsin 1 (cone pigments), medium-wave-sensitive protein_coding Homo_sapiens
ENSG00000269433 OPN1MW opsin 1 (cone pigments), medium-wave-sensitive protein_coding Homo_sapiens
ENSMUSG00000031394 Opn1mw opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) protein_coding Mus_musculus

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