C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: opsin 1 (cone pigments), medium-wave-sensitive 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166160 OPN1MW2 9606 + X:154219756-154233286 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369929 OPN1MW2-001 154219756-154233286 protein_coding
  ENST00000430419 OPN1MW2-002 154227196-154233277 protein_coding
  ENST00000488220 OPN1MW2-003 154219797-154230651 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GD CIL_0007GD_0004 CGP X:154182596-154233286
CIL_0007GD CIL_0007GD_0003 CGP X:154219756-154271805

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007601 IEA visual perception
GO:0007603 TAS phototransduction, visible light
GO:0009881 IEA photoreceptor activity
GO:0016021 IEA integral component of membrane
GO:0018298 IEA protein-chromophore linkage
GO:0032467 IMP positive regulation of cytokinesis
GO:0042622 TAS photoreceptor outer segment membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044861 opn1lw2 opsin 1 (cone pigments), long-wave-sensitive, 2 protein_coding Danio_rerio
ENSDARG00000044862 opn1lw1 opsin 1 (cone pigments), long-wave-sensitive, 1 protein_coding Danio_rerio
ENSMUSG00000031394 Opn1mw opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) protein_coding Mus_musculus

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