C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger CCHC-type and RNA binding motif 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045691 zcrb1 7955 - 4:12989802-12996032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000067172 zcrb1-201 12989802-12996014 protein_coding
  ENSDART00000067174 zcrb1-001 12989811-12996032 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000067172ENSDART00000067174
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000067172 2.057±0.57 5.933±0.14 N/A 0.025±0.00 1.332±0.00
ENSDART00000067174 3.792±1.99 4.673±3.55 5.697±2.29 0.026±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000468 CIL_000468_0001 CGP 4:12970046-12996032
CIL_0003DG CIL_0003DG_0001 CGP 4:12989802-13060290

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000139168 ZCRB1 zinc finger CCHC-type and RNA binding motif 1 protein_coding Homo_sapiens
ENSMUSG00000022635 Zcrb1 zinc finger CCHC-type and RNA binding motif 1 protein_coding Mus_musculus

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