C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: periphilin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045692 pphln1 7955 + 4:12965982-13027964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000067175 pphln1-001 12996271-13027964 protein_coding
  ENSDART00000133596 pphln1-005 13018061-13027456 protein_coding
  ENSDART00000137549 pphln1-004 12965982-13008667 protein_coding
  ENSDART00000141742 pphln1-003 12996257-13008526 protein_coding
  ENSDART00000142466 pphln1-002 12996102-13011910 protein_coding

Danio rerio EnsemblZv9

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000067175ENSDART00000141742ENSDART00000142466
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000067175 7.863±2.18 8.840±5.03 12.734±5.17 1.096±0.00 3.336±0.00
ENSDART00000141742 N/A 3.944±0.00 N/A N/A N/A
ENSDART00000142466 N/A N/A N/A 0.381±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DL CIL_0003DL_0001 CGP 4:12875335-12966712

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134283 PPHLN1 periphilin 1 protein_coding Homo_sapiens
ENSMUSG00000036167 Pphln1 periphilin 1 protein_coding Mus_musculus
ENSMUSG00000079737 3110001I22Rik RIKEN cDNA 3110001I22 gene protein_coding Mus_musculus

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