C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003DL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045687-ENSDARG00000022550 CGP 7955 4:12875335-12966712
GeneTranscriptPositionBiotype
ENSDARG00000022550 (gxylt1b)
glucoside xylosyltransferase 1b 		ENSDART00000032805 (gxylt1b-001) 12957297-12966712 protein_coding
ENSDARG00000045687 (pdzrn4)
PDZ domain containing ring finger 4 		ENSDART00000067168 (pdzrn4-001) 12875335-12925969 protein_coding
ENSDARG00000045692 (pphln1)
periphilin 1 		ENSDART00000067175 (pphln1-001) 12996271-13027964 protein_coding
ENSDART00000133596 (pphln1-005) 13018061-13027456 protein_coding
ENSDART00000137549 (pphln1-004) 12965982-13008667 protein_coding
ENSDART00000141742 (pphln1-003) 12996257-13008526 protein_coding
ENSDART00000142466 (pphln1-002) 12996102-13011910 protein_coding
CIL_0003DL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165966-ENSG00000151233 CGP 9606 12:41188448-42144879
GeneTranscriptPositionBiotype
ENSG00000151233 (GXYLT1)
glucoside xylosyltransferase 1 		ENST00000280876 (GXYLT1-002) 42087145-42144712 protein_coding
ENST00000398675 (GXYLT1-001) 42081845-42144879 protein_coding
ENSG00000165966 (PDZRN4)
PDZ domain containing ring finger 4 		ENST00000298919 (PDZRN4-003) 41437739-41574582 protein_coding
ENST00000402685 (PDZRN4-001) 41188448-41574118 protein_coding
ENST00000539469 (PDZRN4-002) 41437683-41574332 protein_coding
ENST00000548316 (PDZRN4-004) 41509551-41574590 retained_intron
ENSG00000222884 (AC023513.1)
 ENST00000410952 (AC023513.1-201) 42079761-42079882 miRNA
ENSG00000257128 (RP11-2A1.1)
 ENST00000546669 (RP11-2A1.1-001) 41911256-41912212 processed_pseudogene
ENSG00000257228 (RP11-413B19.2)
 ENST00000547168 (RP11-413B19.2-001) 41409467-41473510 antisense
ENST00000548450 (RP11-413B19.2-002) 41411525-41412477 antisense
ENSG00000257239 (RP11-630C16.2)
 ENST00000550874 (RP11-630C16.2-001) 41829898-41932592 lincRNA
ENSG00000257784 (RP11-630C16.1)
 ENST00000548210 (RP11-630C16.1-001) 41764223-41765558 lincRNA
ENST00000552712 (RP11-630C16.1-002) 41764189-41765581 lincRNA
ENSG00000257858 (MTND1P24)
MT-ND1 pseudogene 24 		ENST00000552175 (MTND1P24-001) 41699391-41700251 unprocessed_pseudogene
ENSG00000258239 (MTND2P17)
MT-ND2 pseudogene 17 		ENST00000550281 (MTND2P17-001) 41698495-41699182 unprocessed_pseudogene
ENSG00000271379 (RP11-440G2.2)
 ENST00000604396 (RP11-440G2.2-001) 42069935-42070625 processed_pseudogene
CIL_0003DL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036218-ENSMUSG00000036197 CGP 10090 15:92396915-93275161
GeneTranscriptPositionBiotype
ENSMUSG00000036197 (Gxylt1)
glucoside xylosyltransferase 1 		ENSMUST00000049484 (Gxylt1-001) 93239742-93275161 protein_coding
ENSMUST00000057896 (Gxylt1-002) 93244455-93275151 protein_coding
ENSMUSG00000036218 (Pdzrn4)
PDZ domain containing RING finger 4 		ENSMUST00000035399 (Pdzrn4-201) 92597109-92771819 protein_coding
ENSMUST00000169942 (Pdzrn4-202) 92396915-92771819 protein_coding
ENSMUSG00000065911 (Gm24447)
predicted gene, 24447 		ENSMUST00000083977 (Gm24447-201) 93234363-93234700 misc_RNA
ENSMUSG00000097989 (Gm4335)
predicted gene 4335 		ENSMUST00000182581 (Gm4335-001) 93196595-93197598 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DL_0001ENSDARG00000022550ENSDART00000032805ENSDARG00000045687ENSDART00000067168ENSDARG00000045692ENSDART00000067175ENSDART00000133596ENSDART00000137549ENSDART00000141742ENSDART00000142466CIL_0003DL_0002ENSG00000151233ENST00000280876ENST00000398675ENSG00000165966ENST00000298919ENST00000402685ENST00000539469ENST00000548316ENSG00000222884ENST00000410952ENSG00000257128ENST00000546669ENSG00000257228ENST00000547168ENST00000548450ENSG00000257239ENST00000550874ENSG00000257784ENST00000548210ENST00000552712ENSG00000257858ENST00000552175ENSG00000258239ENST00000550281ENSG00000271379ENST00000604396CIL_0003DL_0003ENSMUSG00000036197ENSMUST00000049484ENSMUST00000057896ENSMUSG00000036218ENSMUST00000035399ENSMUST00000169942ENSMUSG00000065911ENSMUST00000083977ENSMUSG00000097989ENSMUST00000182581
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DL_0001ENSDARG00000022550ENSDART00000032805ENSDARG00000045687ENSDART00000067168ENSDARG00000045692ENSDART00000067175ENSDART00000141742ENSDART00000142466CIL_0003DL_0002ENSG00000151233ENST00000280876ENST00000398675ENSG00000165966ENST00000298919ENST00000402685ENST00000539469ENST00000548316ENSG00000222884ENST00000410952ENSG00000257128ENST00000546669ENSG00000257228ENST00000547168ENST00000548450ENSG00000257239ENST00000550874ENSG00000257784ENST00000548210ENST00000552712ENSG00000257858ENST00000552175ENSG00000258239ENST00000550281ENSG00000271379ENST00000604396CIL_0003DL_0003ENSMUSG00000036197ENSMUST00000049484ENSMUST00000057896ENSMUSG00000036218ENSMUST00000035399ENSMUST00000169942ENSMUSG00000065911ENSMUST00000083977ENSMUSG00000097989ENSMUST00000182581
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022550 ENSDART00000032805 N/A N/A N/A 1.015±0.50 N/A N/A 0.660±0.24 1.124±0.74 N/A N/A 0.074±0.00 N/A N/A N/A
ENSDARG00000045687 ENSDART00000067168 N/A N/A N/A 1.859±0.22 N/A N/A 0.047±0.01 0.429±0.00 0.012±0.00 N/A 0.221±0.00 N/A N/A N/A
ENSDARG00000045692 ENSDART00000067175 N/A N/A N/A 7.863±2.18 N/A N/A 8.840±5.03 12.734±5.17 1.096±0.00 N/A 3.336±0.00 N/A N/A N/A
ENSDART00000133596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141742 N/A N/A N/A N/A N/A N/A 3.944±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142466 N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151233 ENST00000280876 N/A N/A 0.830±0.00 0.340±0.00 N/A N/A N/A 1.071±0.00 0.847±0.00 1.100±0.00 0.462±0.00 1.698±0.00 N/A 2.617±0.00
ENST00000398675 0.420±0.00 N/A N/A 0.258±0.00 0.392±0.20 0.376±0.24 0.564±0.23 1.171±0.00 0.523±0.00 1.432±0.00 0.174±0.00 0.646±0.30 1.042±0.46 2.668±0.99
ENSG00000165966 ENST00000298919 N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A 0.335±0.00 0.138±0.00 N/A N/A N/A
ENST00000402685 0.092±0.00 1.423±0.00 N/A 0.779±0.17 1.029±0.72 3.031±1.36 0.034±0.00 0.153±0.00 3.304±3.29 0.202±0.10 0.110±0.00 0.547±0.25 1.321±1.25 2.235±0.32
ENST00000539469 0.070±0.00 N/A N/A 0.324±0.11 N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000548316 0.145±0.00 0.486±0.00 0.246±0.00 0.411±0.00 0.472±0.35 2.881±1.79 0.048±0.00 0.201±0.02 0.060±0.00 0.553±0.00 0.070±0.00 0.121±0.00 1.238±0.00 1.412±0.73
ENSG00000222884 ENST00000410952 N/A 0.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257128 ENST00000546669 N/A N/A N/A N/A 0.956±0.00 0.741±0.00 N/A N/A 0.121±0.00 0.393±0.00 N/A 0.440±0.00 N/A N/A
ENSG00000257228 ENST00000547168 0.037±0.00 0.110±0.00 N/A 0.012±0.00 0.035±0.00 0.033±0.00 0.033±0.00 N/A N/A N/A N/A N/A 0.027±0.00 0.104±0.03
ENST00000548450 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A 2.358±0.00 N/A N/A N/A 0.036±0.00 N/A
ENSG00000257239 ENST00000550874 0.152±0.00 0.539±0.00 N/A 0.133±0.00 0.438±0.00 N/A 0.150±0.00 0.614±0.00 0.210±0.00 N/A 0.347±0.00 0.114±0.00 N/A 0.228±0.13
ENSG00000257784 ENST00000548210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.119±0.26
ENST00000552712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.763±0.15
ENSG00000257858 ENST00000552175 N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000258239 ENST00000550281 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00
ENSG00000271379 ENST00000604396 N/A 0.073±0.00 N/A N/A N/A 0.016±0.00 0.034±0.00 N/A N/A N/A N/A N/A N/A 0.087±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036197 ENSMUST00000049484 1.156±0.53 2.507±0.78 0.500±0.00 0.390±0.00 2.174±0.13 2.145±0.00 0.563±0.00 0.936±0.52 0.634±0.15 1.493±0.00 0.205±0.05 2.153±0.41 3.783±3.25 N/A
ENSMUST00000057896 N/A 1.810±0.00 N/A N/A 4.155±0.80 N/A N/A N/A N/A 3.503±0.00 N/A 4.064±1.36 11.902±0.00 9.316±2.04
ENSMUSG00000036218 ENSMUST00000035399 0.180±0.10 0.028±0.00 0.065±0.05 4.336±3.34 0.045±0.01 N/A N/A 0.175±0.03 0.011±0.01 N/A 0.122±0.07 0.499±0.44 0.012±0.01 0.365±0.10
ENSMUST00000169942 N/A 0.041±0.02 0.054±0.01 1.361±0.00 N/A 0.126±0.06 0.494±0.11 0.051±0.01 0.011±0.01 0.096±0.02 N/A 1.207±0.97 0.018±0.00 N/A
ENSMUSG00000065911 ENSMUST00000083977 0.502±0.21 0.188±0.02 149.583±149.53 740.389±0.00 0.569±0.27 0.287±0.05 0.190±0.00 0.402±0.30 175.451±12.69 0.545±0.24 N/A 0.971±0.29 0.077±0.02 0.713±0.40
ENSMUSG00000097989 ENSMUST00000182581 0.271±0.24 0.256±0.15 0.811±0.63 0.180±0.17 0.365±0.32 0.138±0.05 0.427±0.27 0.362±0.22 0.222±0.23 N/A 0.452±0.08 0.175±0.07 0.149±0.07 0.053±0.01

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