C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 6 (neurotransmitter transporter, GABA), member 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045944 slc6a1a 7955 - 23:4886764-4910838 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000124613 slc6a1a-201 4886764-4910227 protein_coding
  ENSDART00000133701 slc6a1a-001 4890163-4910838 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000124613ENSDART00000133701
Transcript ID Brain Heart Liver Muscle
ENSDART00000124613 40.382±8.17 0.037±0.02 0.023±0.00 N/A
ENSDART00000133701 26.523±12.25 N/A N/A 0.699±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005332 IEA gamma-aminobutyric acid:sodium symporter activity
GO:0005887 IEA integral to plasma membrane
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000157103 SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1 protein_coding Homo_sapiens
ENSMUSG00000030310 Slc6a1 solute carrier family 6 (neurotransmitter transporter, GABA), member 1 protein_coding Mus_musculus

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