C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052343 spata18 7955 - 20:23148025-23158943 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000109234 spata18-001 23148025-23158943 protein_coding
  ENSDART00000136359 spata18-004 23148951-23150926 retained_intron
  ENSDART00000137594 spata18-002 23148562-23151087 processed_transcript
  ENSDART00000142469 spata18-003 23148665-23151091 processed_transcript
  ENSDART00000143812 spata18-005 23148792-23150770 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109234ENSDART00000137594ENSDART00000143812
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109234 0.313±0.07 0.067±0.02 1.081±0.04 0.019±0.00 0.099±0.00
ENSDART00000137594 N/A 0.117±0.00 3.425±0.66 N/A N/A
ENSDART00000143812 N/A N/A N/A N/A 0.266±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 ISS cytoplasm
GO:0005739 IEA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0016020 IEA membrane
GO:0033554 IEA cellular response to stress
GO:0035694 ISS mitochondrial protein catabolic process
GO:0035695 ISS mitochondrion degradation by induced vacuole formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163071 SPATA18 spermatogenesis associated 18 protein_coding Homo_sapiens
ENSMUSG00000029155 Spata18 spermatogenesis associated 18 protein_coding Mus_musculus

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