C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ligase III, DNA, ATP-dependent
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052553 lig3 7955 + 5:62528093-62548484 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000074426 lig3-201 62528093-62548484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000074426
Transcript ID Brain Heart Liver Muscle
ENSDART00000074426 3.520±0.00 2.161±2.08 1.457±0.00 1.422±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003677 IEA DNA binding
GO:0003909 IEA DNA ligase activity
GO:0003910 IEA DNA ligase (ATP) activity
GO:0005524 IEA ATP binding
GO:0005634 IBA nucleus
GO:0005694 IBA chromosome
GO:0006260 IEA DNA replication
GO:0006266 IBA DNA ligation
GO:0006273 IBA lagging strand elongation
GO:0006281 IEA DNA repair
GO:0006289 IBA nucleotide-excision repair
GO:0006310 IEA DNA recombination
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0051103 IEA DNA ligation involved in DNA repair

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000005156 LIG3 ligase III, DNA, ATP-dependent protein_coding Homo_sapiens
ENSMUSG00000020697 Lig3 ligase III, DNA, ATP-dependent protein_coding Mus_musculus

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