C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: translocated promoter region a (to activated MET oncogene)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052914 tpra 7955 - 2:20584192-20662758 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000027144 tpra-201 20584195-20595325 protein_coding
  ENSDART00000074850 tpra-001 20584192-20621796 protein_coding
  ENSDART00000111541 tpra-202 20608938-20662758 protein_coding
  ENSDART00000148393 tpra-203 20632415-20662758 protein_coding
  ENSDART00000152110 tpra-002 20622324-20662758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000027144ENSDART00000074850ENSDART00000111541ENSDART00000152110
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000027144 11.576±0.00 9.756±0.00 8.015±0.41 1.151±0.00 5.734±0.00
ENSDART00000074850 1.602±0.00 2.493±0.00 1.677±0.00 0.099±0.00 0.863±0.00
ENSDART00000111541 1.089±0.00 1.128±0.54 0.274±0.00 N/A N/A
ENSDART00000152110 0.915±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BO CIL_0001BO_0001 CGP 2:20566497-20662758
CIL_0001BN CIL_0001BN_0001 CGP 2:20584192-20675820

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore
GO:0006606 IEA protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000047410 TPR translocated promoter region, nuclear basket protein protein_coding Homo_sapiens
ENSMUSG00000006005 Tpr translocated promoter region, nuclear basket protein protein_coding Mus_musculus

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