C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: si:ch211-202f3.3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052917 si:ch211-202f3.3 7955 + 17:45744842-45766706 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000074854 si:ch211-202f3.3-001 45744842-45766706 protein_coding
  ENSDART00000153922 si:ch211-202f3.3-002 45744873-45748481 retained_intron
  ENSDART00000154718 si:ch211-202f3.3-003 45748143-45749144 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000074854ENSDART00000154718
Transcript ID Brain Heart Kidney Muscle
ENSDART00000074854 0.271±0.16 0.490±0.25 0.419±0.26 0.244±0.00
ENSDART00000154718 0.395±0.34 0.614±0.00 N/A 0.140±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004198 IEA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005622 IEA intracellular
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000162949 CAPN13 calpain 13 protein_coding Homo_sapiens
ENSG00000214711 CAPN14 calpain 14 protein_coding Homo_sapiens
ENSMUSG00000043705 Capn13 calpain 13 protein_coding Mus_musculus

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