C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY-box containing gene 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000053569 sox3 7955 + 14:33703957-33705720 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000075617 sox3-001 33703957-33705720 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000075617
Transcript ID Brain Heart Kidney Muscle
ENSDART00000075617 7.009±2.59 0.465±0.26 0.861±0.46 0.716±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007417 IMP central nervous system development
GO:0007422 IGI peripheral nervous system development
GO:0030182 IMP neuron differentiation
GO:0043049 IGI otic placode formation
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134595 SOX3 SRY (sex determining region Y)-box 3 protein_coding Homo_sapiens
ENSMUSG00000045179 Sox3 SRY (sex determining region Y)-box 3 protein_coding Mus_musculus

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