C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired box gene 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000053829 pax9 7955 - 17:38403987-38458583 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000075932 pax9-002 38403987-38411635 protein_coding
  ENSDART00000075936 pax9-001 38403987-38411635 protein_coding
  ENSDART00000152056 pax9-003 38410461-38458583 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000075932ENSDART00000075936ENSDART00000152056
Transcript ID Brain Heart Kidney
ENSDART00000075932 0.325±0.24 0.104±0.00 0.388±0.04
ENSDART00000075936 N/A 0.032±0.00 0.117±0.00
ENSDART00000152056 N/A 0.317±0.00 0.177±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LS CIL_0007LS_0006 UCNEbase 17:38228870-38518711

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0060022 IMP hard palate development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198807 PAX9 paired box 9 protein_coding Homo_sapiens
ENSMUSG00000001497 Pax9 paired box 9 protein_coding Mus_musculus

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