C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CCR4-NOT transcription complex, subunit 6-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000054597 cnot6l 7955 - 5:40386938-40424923 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000076807 cnot6l-001 40386938-40424923 protein_coding
  ENSDART00000147121 cnot6l-002 40414621-40424803 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000076807
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000076807 0.914±0.00 74.893±6.89 12.057±0.00 3.378±0.00 47.379±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HW CIL_0007HW_0001 CGP 5:40386938-40435021

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004518 IEA nuclease activity
GO:0004527 IEA exonuclease activity
GO:0004535 IEA poly(A)-specific ribonuclease activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006397 IEA mRNA processing
GO:0006417 IEA regulation of translation
GO:0016787 IEA hydrolase activity
GO:0030014 ISS CCR4-NOT complex
GO:0031047 IEA gene silencing by RNA
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000138767 CNOT6L CCR4-NOT transcription complex, subunit 6-like protein_coding Homo_sapiens
ENSMUSG00000034724 Cnot6l CCR4-NOT transcription complex, subunit 6-like protein_coding Mus_musculus

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