C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type IV, alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055009 col4a1 7955 - 9:8676056-8715240 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077296 col4a1-001 8676056-8711985 protein_coding
  ENSDART00000130442 col4a1-201 8677265-8715240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000077296ENSDART00000130442
Transcript ID Brain Heart Muscle
ENSDART00000077296 0.541±0.00 1.012±0.00 4.982±0.00
ENSDART00000130442 N/A 0.777±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058N CIL_00058N_0001 CGP 9:8676056-8941992

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000187498 COL4A1 collagen, type IV, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000031502 Col4a1 collagen, type IV, alpha 1 protein_coding Mus_musculus

Loading