C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00058N_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000055009-ENSDARG00000020781 | CGP | 7955 | 9:8676056-8941992  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000055009  (col4a1)collagen, type IV, alpha 1 |
ENSDART00000077296 (col4a1-001)
|
8676056-8711985 | protein_coding | |
|
ENSDART00000130442 (col4a1-201)
|
8677265-8715240 | protein_coding | ||
| CIL_00058N_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000187498-ENSG00000134871 | CGP | 9606 | 13:110148963-110513027 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000134871 (COL4A2) collagen, type IV, alpha 2 |
ENST00000360467 (COL4A2-001)
|
110307267-110513027 | protein_coding | |
|
ENST00000400163 (COL4A2-004)
|
110305812-110424868 | protein_coding | ||
|
ENST00000462309 (COL4A2-006)
|
110430051-110430883 | processed_transcript | ||
|
ENST00000463084 (COL4A2-003)
|
110507444-110512133 | processed_transcript | ||
|
ENST00000478681 (COL4A2-007)
|
110462022-110462449 | processed_transcript | ||
|
ENST00000480609 (COL4A2-009)
|
110506468-110508330 | retained_intron | ||
|
ENST00000480771 (COL4A2-005)
|
110307267-110328549 | processed_transcript | ||
|
ENST00000483683 (COL4A2-008)
|
110477923-110485660 | processed_transcript | ||
|
ENST00000494852 (COL4A2-002)
|
110469217-110473594 | processed_transcript | ||
|
ENST00000617564 (COL4A2-010)
|
110458888-110459755 | protein_coding | ||
|
ENSG00000187498 (COL4A1) collagen, type IV, alpha 1 |
ENST00000375820 (COL4A1-001)
|
110148963-110307149 | protein_coding | |
|
ENST00000467182 (COL4A1-004)
|
110161018-110163490 | retained_intron | ||
|
ENST00000474391 (COL4A1-003)
|
110161958-110163558 | retained_intron | ||
|
ENST00000543140 (COL4A1-005)
|
110190743-110307131 | protein_coding | ||
|
ENST00000615732 (COL4A1-006)
|
110206661-110298899 | protein_coding | ||
|
ENSG00000275611 (RP11-291I6.2) |
ENST00000619688 (RP11-291I6.2-001)
|
110429026-110429342 | sense_intronic | |
|
ENSG00000279237 (RP11-212E4.1) |
ENST00000624845 (RP11-212E4.1-001)
|
110265251-110266113 | TEC | |
| CIL_00058N_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000031502-ENSMUSG00000031503 | CGP | 10090 | 8:11198423-11449287 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000031502 (Col4a1) collagen, type IV, alpha 1 |
ENSMUST00000033898 (Col4a1-001)
|
11198423-11312826 | protein_coding | |
|
ENSMUST00000130488 (Col4a1-002)
|
11212401-11216801 | processed_transcript | ||
|
ENSMUSG00000031503 (Col4a2) collagen, type IV, alpha 2 |
ENSMUST00000033899 (Col4a2-001)
|
11312805-11449287 | protein_coding | |
|
ENSMUST00000145295 (Col4a2-002)
|
11404908-11421254 | protein_coding | ||
|
ENSMUST00000146219 (Col4a2-003)
|
11441109-11443702 | processed_transcript | ||
|
ENSMUSG00000085573 (Gm15418) predicted gene 15418 |
ENSMUST00000151014 (Gm15418-001)
|
11187755-11204503 | antisense | |
Expression Patterns
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