C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gametogenetin binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055086 ggnbp2 7955 + 5:4023569-4059594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077399 ggnbp2-201 4023597-4056493 protein_coding
  ENSDART00000105832 ggnbp2-002 4023579-4059594 protein_coding
  ENSDART00000112134 ggnbp2-202 4024683-4059007 protein_coding
  ENSDART00000113627 ggnbp2-203 4023579-4059593 protein_coding
  ENSDART00000115231 ggnbp2-004 4023569-4035174 processed_transcript
  ENSDART00000121415 ggnbp2-001 4023597-4056511 protein_coding
  ENSDART00000132056 ggnbp2-007 4023667-4032253 processed_transcript
  ENSDART00000137068 ggnbp2-005 4024290-4032285 processed_transcript
  ENSDART00000142461 ggnbp2-006 4024531-4035086 retained_intron
  ENSDART00000144012 ggnbp2-003 4054067-4056392 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000077399ENSDART00000105832ENSDART00000112134ENSDART00000113627
Transcript ID Brain Heart Kidney Muscle
ENSDART00000077399 N/A 0.151±0.00 N/A N/A
ENSDART00000105832 7.411±3.83 0.853±0.00 12.165±0.00 5.057±0.00
ENSDART00000112134 N/A 0.720±0.00 N/A 2.719±0.00
ENSDART00000113627 9.173±0.00 1.417±1.17 12.850±4.67 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HP CIL_0005HP_0001 CGP 5:4014133-4059594
CIL_0005HQ CIL_0005HQ_0001 CGP 5:4023569-4150251

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000278311 GGNBP2 gametogenetin binding protein 2 protein_coding Homo_sapiens
ENSMUSG00000020530 Ggnbp2 gametogenetin binding protein 2 protein_coding Mus_musculus

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