C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055100 cxcl12b 7955 - 22:27551657-27567596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077411 cxcl12b-001 27551657-27567596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077411
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077411 30.446±6.89 10.357±2.12 6.450±1.87 0.041±0.00 46.157±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IGI cell morphogenesis
GO:0001570 IMP vasculogenesis
GO:0001764 IMP neuron migration
GO:0002040 IMP sprouting angiogenesis
GO:0002042 IGI cell migration involved in sprouting angiogenesis
GO:0005576 IEA extracellular region
GO:0006955 IEA immune response
GO:0008009 IEA chemokine activity
GO:0031290 IGI retinal ganglion cell axon guidance
GO:0042056 IDA chemoattractant activity
GO:0042074 IGI cell migration involved in gastrulation
GO:0050918 IDA positive chemotaxis
GO:0050930 IGI induction of positive chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000107562 CXCL12 chemokine (C-X-C motif) ligand 12 protein_coding Homo_sapiens
ENSMUSG00000061353 Cxcl12 chemokine (C-X-C motif) ligand 12 protein_coding Mus_musculus

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