C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cathepsin B, a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055120 ctsba 7955 + 17:32828689-32837272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077418 ctsba-001 32828691-32836041 protein_coding
  ENSDART00000135339 ctsba-003 32828689-32830862 retained_intron
  ENSDART00000136459 ctsba-007 32828701-32833498 processed_transcript
  ENSDART00000137270 ctsba-004 32828720-32833602 retained_intron
  ENSDART00000137617 ctsba-009 32830590-32835699 retained_intron
  ENSDART00000138373 ctsba-008 32830648-32835948 processed_transcript
  ENSDART00000142449 ctsba-005 32828747-32833715 retained_intron
  ENSDART00000144217 ctsba-006 32829689-32835432 protein_coding
  ENSDART00000147144 ctsba-002 32828689-32835309 processed_transcript
  ENSDART00000152067 ctsba-010 32833682-32837272 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077418ENSDART00000138373ENSDART00000147144
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077418 41.282±3.06 69.743±43.06 93.035±67.03 13.861±0.00 78.349±0.00
ENSDART00000138373 60.033±9.68 N/A N/A N/A N/A
ENSDART00000147144 N/A 31.872±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004197 IEA cysteine-type endopeptidase activity
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0016787 IEA hydrolase activity
GO:0031101 IEP fin regeneration
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164733 CTSB cathepsin B protein_coding Homo_sapiens
ENSMUSG00000021939 Ctsb cathepsin B protein_coding Mus_musculus

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