C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 47
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055436 TRIM47 (33 of 90) 7955 - 20:26959808-26967060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000103261 TRIM47 (33 of 90)-201 26959808-26966412 protein_coding
  ENSDART00000133476 TRIM47 (33 of 90)-002 26964609-26965378 retained_intron
  ENSDART00000139756 TRIM47 (33 of 90)-001 26961103-26967060 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000103261ENSDART00000139756
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000103261 0.594±0.31 1.151±0.00 0.707±0.00 0.043±0.00 N/A
ENSDART00000139756 0.621±0.52 1.184±0.38 1.525±0.00 0.087±0.00 0.419±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132481 TRIM47 tripartite motif containing 47 protein_coding Homo_sapiens
ENSMUSG00000020773 Trim47 tripartite motif-containing 47 protein_coding Mus_musculus

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