C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: non imprinted in Prader-Willi/Angelman syndrome 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055917 nipa1 7955 - 6:37694067-37698059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000078324 nipa1-001 37694067-37698059 protein_coding
  ENSDART00000149231 nipa1-002 37696903-37698045 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000078324ENSDART00000149231
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000078324 1.998±0.83 0.905±0.86 3.943±0.00 0.829±0.00 0.133±0.00
ENSDART00000149231 0.638±0.34 0.834±0.73 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L7 CIL_0006L7_0001 CGP 6:37681956-37698059
CIL_000391 CIL_000391_0001 CGP 6:37694067-37798075

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IEA magnesium ion transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170113 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 protein_coding Homo_sapiens
ENSMUSG00000047037 Nipa1 non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human) protein_coding Mus_musculus

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