C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000391_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055917-ENSDARG00000073841 CGP 7955 6:37694067-37798075
GeneTranscriptPositionBiotype
ENSDARG00000055917 (nipa1)
non imprinted in Prader-Willi/Angelman syndrome 1
ENSDART00000078324 (nipa1-001) 37694067-37698059 protein_coding
ENSDART00000149231 (nipa1-002) 37696903-37698045 retained_intron
ENSDARG00000073841 (herc2)
hect domain and RLD 2
ENSDART00000110770 (herc2-201) 37703111-37798075 protein_coding
ENSDART00000154364 (herc2-001) 37701129-37730316 protein_coding
CIL_000391_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047037-ENSMUSG00000030451 CGP 10090 7:55977567-56231794
GeneTranscriptPositionBiotype
ENSMUSG00000030451 (Herc2)
hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
ENSMUST00000076226 (Herc2-201) 56050155-56231794 protein_coding
ENSMUST00000164095 (Herc2-202) 56050389-56231763 protein_coding
ENSMUSG00000047037 (Nipa1)
non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)
ENSMUST00000052204 (Nipa1-001) 55977567-56019954 protein_coding
ENSMUSG00000078087 (Rps12l1)
ribosomal protein S12-like 1
ENSMUST00000183090 (Rps12l1-001) 56014016-56014414 processed_pseudogene
ENSMUSG00000087178 (A230056P14Rik)
RIKEN cDNA A230056P14 gene
ENSMUST00000130189 (A230056P14Rik-001) 55962531-55980868 processed_transcript
ENSMUST00000149506 (A230056P14Rik-002) 55962531-55973080 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000391_0001ENSDARG00000055917ENSDART00000078324ENSDART00000149231ENSDARG00000073841ENSDART00000110770ENSDART00000154364CIL_000391_0002ENSMUSG00000030451ENSMUST00000076226ENSMUST00000164095ENSMUSG00000047037ENSMUST00000052204ENSMUSG00000078087ENSMUST00000183090ENSMUSG00000087178ENSMUST00000130189ENSMUST00000149506
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000391_0001ENSDARG00000055917ENSDART00000078324ENSDART00000149231ENSDARG00000073841ENSDART00000110770CIL_000391_0002ENSMUSG00000030451ENSMUST00000076226ENSMUST00000164095ENSMUSG00000047037ENSMUST00000052204ENSMUSG00000078087ENSMUST00000183090ENSMUSG00000087178ENSMUST00000130189
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055917 ENSDART00000078324 N/A N/A N/A 1.998±0.83 N/A N/A 0.905±0.86 3.943±0.00 0.829±0.00 N/A 0.133±0.00 N/A N/A N/A
ENSDART00000149231 N/A N/A N/A 0.638±0.34 N/A N/A 0.834±0.73 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000073841 ENSDART00000110770 N/A N/A N/A 6.511±0.00 N/A N/A 3.122±1.39 3.307±1.83 N/A N/A N/A N/A N/A N/A
ENSDART00000154364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030451 ENSMUST00000076226 2.598±1.13 2.138±0.96 6.296±1.16 6.309±1.80 2.337±1.04 1.481±0.65 1.937±0.29 2.190±0.71 1.600±1.00 4.339±1.15 4.461±1.23 4.502±1.98 3.921±1.50 4.401±1.52
ENSMUST00000164095 2.649±0.29 3.306±1.79 N/A 16.740±0.00 3.208±1.00 3.477±0.26 1.823±0.34 2.072±0.81 1.392±0.74 2.294±0.81 2.405±0.80 6.004±2.86 7.526±2.76 5.565±0.76
ENSMUSG00000047037 ENSMUST00000052204 4.071±0.50 3.527±0.25 7.125±0.71 9.464±2.25 2.260±0.79 3.103±0.23 2.299±0.15 2.858±0.57 4.264±4.40 8.606±0.24 0.836±0.07 5.712±2.18 1.335±0.52 0.619±0.20
ENSMUSG00000078087 ENSMUST00000183090 N/A N/A N/A 32.631±0.00 N/A N/A N/A N/A 73.123±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000087178 ENSMUST00000130189 0.686±0.00 N/A N/A N/A N/A N/A N/A 0.456±0.02 N/A N/A N/A 1.170±0.40 0.455±0.13 0.571±0.13
ENSMUST00000149506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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