C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heat shock 60kD protein 1 (chaperonin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000056160 hspd1 7955 - 9:33319913-33334091 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000078596 hspd1-001 33319913-33334091 protein_coding
  ENSDART00000127938 hspd1-002 33320422-33333919 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000078596ENSDART00000127938
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000078596 17.039±8.84 15.992±6.91 11.908±1.17 11.730±0.00 8.936±0.00
ENSDART00000127938 18.726±8.40 22.603±2.47 34.668±0.00 13.726±0.00 5.973±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042Q CIL_00042Q_0001 CGP 9:33319913-33338315

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005759 IDA mitochondrial matrix
GO:0006457 IEA protein folding
GO:0006950 IEA response to stress
GO:0031101 IMP fin regeneration
GO:0042026 IEA protein refolding
GO:0042246 IMP tissue regeneration
GO:0044267 IEA cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144381 HSPD1 heat shock 60kDa protein 1 (chaperonin) protein_coding Homo_sapiens
ENSMUSG00000025980 Hspd1 heat shock protein 1 (chaperonin) protein_coding Mus_musculus

Loading