C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 6a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000056625 trpc6a 7955 - 21:21916239-21927431 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000079151 trpc6a-201 21916239-21927431 protein_coding
  ENSDART00000112175 trpc6a-001 21916239-21927431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000079151ENSDART00000112175
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000079151 1.096±0.00 0.081±0.00 N/A 0.208±0.00 N/A
ENSDART00000112175 0.858±0.18 1.919±1.13 0.281±0.00 N/A 0.972±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C4 CIL_0002C4_0001 CGP 21:21916239-21946370

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000137672 TRPC6 transient receptor potential cation channel, subfamily C, member 6 protein_coding Homo_sapiens
ENSMUSG00000031997 Trpc6 transient receptor potential cation channel, subfamily C, member 6 protein_coding Mus_musculus

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