C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoblastoma binding protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000056917 RBBP6 (4 of 71) 7955 - 9:28889242-28890971 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111653 RBBP6 (4 of 71)-201 28889641-28890823 protein_coding
  ENSDART00000115313 RBBP6 (4 of 71)-003 28889247-28890971 protein_coding
  ENSDART00000135346 RBBP6 (4 of 71)-005 28889413-28890646 retained_intron
  ENSDART00000137660 RBBP6 (4 of 71)-008 28889633-28890929 retained_intron
  ENSDART00000138466 RBBP6 (4 of 71)-001 28889242-28890064 processed_transcript
  ENSDART00000140753 RBBP6 (4 of 71)-006 28889466-28890159 retained_intron
  ENSDART00000141116 RBBP6 (4 of 71)-009 28889796-28890971 retained_intron
  ENSDART00000141281 RBBP6 (4 of 71)-007 28889610-28890971 nonsense_mediated_decay
  ENSDART00000142231 RBBP6 (4 of 71)-004 28889298-28890270 retained_intron
  ENSDART00000143166 RBBP6 (4 of 71)-002 28889242-28890971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000111653ENSDART00000138466ENSDART00000140753ENSDART00000141116
Transcript ID Brain Heart Kidney Muscle
ENSDART00000111653 0.384±0.00 N/A N/A N/A
ENSDART00000138466 0.575±0.00 0.069±0.00 0.240±0.00 N/A
ENSDART00000140753 N/A N/A N/A 0.111±0.00
ENSDART00000141116 0.375±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000122257 RBBP6 retinoblastoma binding protein 6 protein_coding Homo_sapiens
ENSMUSG00000030779 Rbbp6 retinoblastoma binding protein 6 protein_coding Mus_musculus

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