C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoblastoma binding protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030779 Rbbp6 10090 + 7:122965686-123002557 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052135 Rbbp6-001 122970564-123002557 protein_coding
  ENSMUST00000071590 Rbbp6-002 122970918-123002557 protein_coding
  ENSMUST00000098062 Rbbp6-005 122970700-122980181 protein_coding
  ENSMUST00000126053 Rbbp6-009 122990130-122992512 retained_intron
  ENSMUST00000137860 Rbbp6-007 122975640-122978761 retained_intron
  ENSMUST00000148880 Rbbp6-006 122965686-122976008 protein_coding
  ENSMUST00000156738 Rbbp6-008 122982542-122985702 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052135ENSMUST00000071590ENSMUST00000098062
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052135 2.944±2.20 8.818±3.90 2.344±0.92 7.137±2.97 3.318±1.89 4.682±0.85 2.395±0.23 2.982±1.08 3.180±0.75 2.418±0.40 2.709±0.70 7.493±1.40 10.690±5.65 20.594±0.00
ENSMUST00000071590 2.064±1.59 N/A 2.478±0.00 5.632±1.64 1.651±0.34 2.490±0.22 0.532±0.06 1.652±0.90 2.497±1.66 2.428±0.21 0.688±0.16 6.316±1.48 9.433±5.16 N/A
ENSMUST00000098062 3.929±0.00 N/A 5.658±0.00 19.080±0.00 N/A N/A 2.612±0.88 2.371±0.26 3.306±0.16 N/A 2.272±0.19 7.639±0.00 4.842±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VB CIL_0003VB_0003 CGP 7:122670492-123002557
CIL_0003V8 CIL_0003V8_0003 CGP 7:122965686-123195288

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0035264 IMP multicellular organism growth
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0044822 IEA poly(A) RNA binding
GO:0048568 IGI embryonic organ development
GO:0061053 IMP somite development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037919 rbbp6 retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000056266 RBBP6 (2 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000056907 RBBP6 (3 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000056917 RBBP6 (4 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000058527 RBBP6 (5 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000069804 RBBP6 (6 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000070812 RBBP6 (7 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000077344 RBBP6 (8 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000077475 RBBP6 (9 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000079615 RBBP6 (10 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000086077 ZGC:174357 Uncharacterized protein; Zgc:174357 protein protein_coding Danio_rerio
ENSDARG00000086942 RBBP6 (12 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000087125 RBBP6 (13 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000087708 RBBP6 (14 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000088009 BX000700.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088166 RBBP6 (16 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000088552 RBBP6 (17 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000088604 RBBP6 (18 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000088658 CU041380.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089037 RBBP6 (20 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000089182 RBBP6 (21 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000090104 RBBP6 (22 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000090197 RBBP6 (23 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000090522 RBBP6 (24 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000091039 RBBP6 (25 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000091883 RBBP6 (26 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000092054 RBBP6 (27 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000092356 RBBP6 (28 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000092670 RBBP6 (29 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000092675 RBBP6 (30 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000092698 RBBP6 (31 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000092821 RBBP6 (32 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000092839 RBBP6 (33 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093017 RBBP6 (34 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093221 RBBP6 (35 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093329 RBBP6 (36 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093439 RBBP6 (37 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093481 RBBP6 (38 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093508 RBBP6 (39 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093654 RBBP6 (40 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093736 RBBP6 (41 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093920 RBBP6 (42 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000093935 RBBP6 (43 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094032 RBBP6 (44 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094049 RBBP6 (45 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094113 RBBP6 (46 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094122 RBBP6 (47 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094152 RBBP6 (48 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094167 RBBP6 (49 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094196 RBBP6 (50 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094291 RBBP6 (51 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094335 RBBP6 (52 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094363 RBBP6 (53 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094532 RBBP6 (54 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094717 RBBP6 (55 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094733 RBBP6 (56 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094765 RBBP6 (57 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094864 RBBP6 (58 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094884 RBBP6 (59 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094940 RBBP6 (60 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000094987 RBBP6 (61 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095000 RBBP6 (62 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095028 RBBP6 (63 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095166 RBBP6 (64 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095172 RBBP6 (65 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095285 RBBP6 (66 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095364 RBBP6 (67 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095367 RBBP6 (68 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095490 RBBP6 (69 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095491 RBBP6 (70 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSDARG00000095575 RBBP6 (71 of 71) retinoblastoma binding protein 6 protein_coding Danio_rerio
ENSG00000122257 RBBP6 retinoblastoma binding protein 6 protein_coding Homo_sapiens

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