C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cathepsin D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000057698 ctsd 7955 + 18:15792763-15805249 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000080423 ctsd-001 15792763-15805249 protein_coding
  ENSDART00000148584 ctsd-002 15792852-15799516 nonsense_mediated_decay
  ENSDART00000149598 ctsd-003 15792876-15797523 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000080423
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000080423 60.987±10.57 121.918±62.02 339.884±214.23 6.603±0.00 102.461±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003406 IMP retinal pigment epithelium development
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0009617 IDA response to bacterium
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117984 CTSD cathepsin D protein_coding Homo_sapiens
ENSG00000250644 RP11-295K3.1 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000415840} protein_coding Homo_sapiens
ENSMUSG00000007891 Ctsd cathepsin D protein_coding Mus_musculus

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