C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sine oculis-related homeobox 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000058004 six2a 7955 + 13:9797891-9800761 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000080805 six2a-001 9797891-9800761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000080805
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000080805 0.596±0.11 0.098±0.02 0.529±0.18 0.032±0.00 26.400±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KD CIL_0007KD_0004 UCNEbase 13:9331455-10073447

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding
GO:0048793 IMP pronephros development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170577 SIX2 SIX homeobox 2 protein_coding Homo_sapiens
ENSMUSG00000024134 Six2 sine oculis-related homeobox 2 protein_coding Mus_musculus

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